IL_4V8G_378

3D structure

PDB id

4V8G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of RMF bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GUGC*GCC

Length

7 nucleotides

Bulged bases

4V8G|1|CA|U|1049

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V8G_378 not in the Motif Atlas

Homologous match to IL_4LFB_043

Geometric discrepancy: 0.3603

The information below is about IL_4LFB_043

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V8G|1|CA|G|1048
4V8G|1|CA|U|1049
4V8G|1|CA|G|1050
4V8G|1|CA|C|1051
*
4V8G|1|CA|G|1207
4V8G|1|CA|C|1208
4V8G|1|CA|C|1209

Current chains

Chain CA

16S Ribosomal RNA

Nearby chains

Chain CC

30S Ribosomal Protein S3

Chain CN

30S Ribosomal Protein S14