IL_4V8G_398

3D structure

PDB id

4V8G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of RMF bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGAG*CGCCGGUGAAAUAC

Length

18 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V8G_398 not in the Motif Atlas

Homologous match to IL_9DFE_086

Geometric discrepancy: 0.2735

The information below is about IL_9DFE_086

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V8G|1|DA|G|2124
4V8G|1|DA|G|2125
4V8G|1|DA|A|2126
4V8G|1|DA|G|2127
*
4V8G|1|DA|C|2161
4V8G|1|DA|G|2162
4V8G|1|DA|C|2163
4V8G|1|DA|C|2164
4V8G|1|DA|G|2165
4V8G|1|DA|G|2166
4V8G|1|DA|U|2167
4V8G|1|DA|G|2168
4V8G|1|DA|A|2169
4V8G|1|DA|A|2170
4V8G|1|DA|A|2171
4V8G|1|DA|U|2172
4V8G|1|DA|A|2173
4V8G|1|DA|C|2174

Current chains

Chain DA

23S Ribosomal RNA

Nearby chains