IL_4V8H_040
3D structure
- PDB id
- 4V8H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of HPF bound to the 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CAG*CUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary: CAG,CUG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V8H_040 not in the Motif Atlas
- Geometric match to IL_5TBW_016
- Geometric discrepancy: 0.1835
- The information below is about IL_5TBW_016
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
4V8H|1|AA|C|985
4V8H|1|AA|A|986
4V8H|1|AA|G|987
*
4V8H|1|AA|C|1218
4V8H|1|AA|U|1219
4V8H|1|AA|G|1220
Current chains
- Chain AA
- 16S Ribosomal RNA
Nearby chains
- Chain AN
- 30S Ribosomal Protein S14
- Chain AS
- 30S Ribosomal Protein S19
Coloring options: