IL_4V8H_056
3D structure
- PDB id
- 4V8H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of HPF bound to the 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CCG*CGG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary: CCG,CGG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V8H_056 not in the Motif Atlas
- Geometric match to IL_6CZR_122
- Geometric discrepancy: 0.2233
- The information below is about IL_6CZR_122
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 183
Unit IDs
4V8H|1|AA|C|1263
4V8H|1|AA|C|1264
4V8H|1|AA|G|1265
*
4V8H|1|AA|C|1270
4V8H|1|AA|G|1271
4V8H|1|AA|G|1272
Current chains
- Chain AA
- 16S Ribosomal RNA
Nearby chains
- Chain AS
- 30S Ribosomal Protein S19
- Chain AU
- 30S Ribosomal Protein THX
Coloring options: