IL_4V8H_146
3D structure
- PDB id
- 4V8H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of HPF bound to the 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CUG*UUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V8H_146 not in the Motif Atlas
- Homologous match to IL_7RQB_083
- Geometric discrepancy: 0.0746
- The information below is about IL_7RQB_083
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_86319.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 270
Unit IDs
4V8H|1|BA|C|2085
4V8H|1|BA|U|2086
4V8H|1|BA|G|2087
*
4V8H|1|BA|U|2232
4V8H|1|BA|U|2233
4V8H|1|BA|G|2234
Current chains
- Chain BA
- 23S Ribosomal RNA
Nearby chains
- Chain B1
- 50S Ribosomal Protein L28
- Chain BD
- 50S Ribosomal Protein L2
Coloring options: