IL_4V8H_223
3D structure
- PDB id
- 4V8H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of HPF bound to the 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GUGC*GCC
- Length
- 7 nucleotides
- Bulged bases
- 4V8H|1|CA|U|1049
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V8H_223 not in the Motif Atlas
- Geometric match to IL_4E48_001
- Geometric discrepancy: 0.1881
- The information below is about IL_4E48_001
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
4V8H|1|CA|G|1048
4V8H|1|CA|U|1049
4V8H|1|CA|G|1050
4V8H|1|CA|C|1051
*
4V8H|1|CA|G|1207
4V8H|1|CA|C|1208
4V8H|1|CA|C|1209
Current chains
- Chain CA
- 16S Ribosomal RNA
Nearby chains
- Chain CC
- 30S Ribosomal Protein S3
- Chain CN
- 30S Ribosomal Protein S14
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