IL_4V8H_228

3D structure

PDB id

4V8H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of HPF bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GUUAGUUGC*GGCACUCUAAC

Length

20 nucleotides

Bulged bases

4V8H|1|CA|U|1125

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V8H|1|CA|G|1120
4V8H|1|CA|U|1121
4V8H|1|CA|U|1122
4V8H|1|CA|A|1123
4V8H|1|CA|G|1124
4V8H|1|CA|U|1125
4V8H|1|CA|U|1126
4V8H|1|CA|G|1127
4V8H|1|CA|C|1128
*
4V8H|1|CA|G|1143
4V8H|1|CA|G|1144
4V8H|1|CA|C|1145
4V8H|1|CA|A|1146
4V8H|1|CA|C|1147
4V8H|1|CA|U|1148
4V8H|1|CA|C|1149
4V8H|1|CA|U|1150
4V8H|1|CA|A|1151
4V8H|1|CA|A|1152
4V8H|1|CA|C|1153

Current chains

Chain CA

16S Ribosomal RNA

Nearby chains

Chain CI

30S Ribosomal Protein S9

Chain CJ

30S Ribosomal Protein S10