IL_4V8H_332
3D structure
- PDB id
- 4V8H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of HPF bound to the 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- UCC*GG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V8H_332 not in the Motif Atlas
- Homologous match to IL_7RQB_090
- Geometric discrepancy: 0.0761
- The information below is about IL_7RQB_090
- Detailed Annotation
- Major groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_27635.3
- Basepair signature
- cWW-cSH-cWW
- Number of instances in this motif group
- 38
Unit IDs
4V8H|1|DA|U|2401
4V8H|1|DA|C|2402
4V8H|1|DA|C|2403
*
4V8H|1|DA|G|2414
4V8H|1|DA|G|2415
Current chains
- Chain DA
- 23S Ribosomal RNA
Nearby chains
- Chain D1
- 50S Ribosomal Protein L28
- Chain D6
- 50S Ribosomal Protein L33
- Chain D8
- 50S Ribosomal Protein L35
- Chain DP
- 50S Ribosomal Protein L15
Coloring options: