IL_4V8I_320

3D structure

PDB id

4V8I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of YfiA bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

GGGAG*CGCCGGUGAAAUACC

Length

20 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V8I|1|DA|G|2123
4V8I|1|DA|G|2124
4V8I|1|DA|G|2125
4V8I|1|DA|A|2126
4V8I|1|DA|G|2127
*
4V8I|1|DA|C|2161
4V8I|1|DA|G|2162
4V8I|1|DA|C|2163
4V8I|1|DA|C|2164
4V8I|1|DA|G|2165
4V8I|1|DA|G|2166
4V8I|1|DA|U|2167
4V8I|1|DA|G|2168
4V8I|1|DA|A|2169
4V8I|1|DA|A|2170
4V8I|1|DA|A|2171
4V8I|1|DA|U|2172
4V8I|1|DA|A|2173
4V8I|1|DA|C|2174
4V8I|1|DA|C|2175

Current chains

Chain DA

23S Ribosomal RNA

Nearby chains