IL_4V8N_413
3D structure
- PDB id
- 4V8N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of agmatidine tRNA-Ile2 bound to the 70S ribosome in the A and P site.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CUGCGUAGGAUAGGUGGGAG*CGCCGGUGAAAUACCACCCUG
- Length
- 41 nucleotides
- Bulged bases
- 4V8N|1|DA|C|2179
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V8N|1|DA|C|2108
4V8N|1|DA|U|2109
4V8N|1|DA|G|2110
4V8N|1|DA|C|2111
4V8N|1|DA|G|2112
4V8N|1|DA|U|2113
4V8N|1|DA|A|2114
4V8N|1|DA|G|2115
4V8N|1|DA|G|2116
4V8N|1|DA|A|2117
4V8N|1|DA|U|2118
4V8N|1|DA|A|2119
4V8N|1|DA|G|2120
4V8N|1|DA|G|2121
4V8N|1|DA|U|2122
4V8N|1|DA|G|2123
4V8N|1|DA|G|2124
4V8N|1|DA|G|2125
4V8N|1|DA|A|2126
4V8N|1|DA|G|2127
*
4V8N|1|DA|C|2161
4V8N|1|DA|G|2162
4V8N|1|DA|C|2163
4V8N|1|DA|C|2164
4V8N|1|DA|G|2165
4V8N|1|DA|G|2166
4V8N|1|DA|U|2167
4V8N|1|DA|G|2168
4V8N|1|DA|A|2169
4V8N|1|DA|A|2170
4V8N|1|DA|A|2171
4V8N|1|DA|U|2172
4V8N|1|DA|A|2173
4V8N|1|DA|C|2174
4V8N|1|DA|C|2175
4V8N|1|DA|A|2176
4V8N|1|DA|C|2177
4V8N|1|DA|C|2178
4V8N|1|DA|C|2179
4V8N|1|DA|U|2180
4V8N|1|DA|G|2181
Current chains
- Chain DA
- 23S RIBOSOMAL RNA
Nearby chains
- Chain CW
- Transfer RNA; tRNA
- Chain DC
- 50S RIBOSOMAL PROTEIN L1
Coloring options: