IL_4V8O_210
3D structure
- PDB id
- 4V8O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the hybrid state of ribosome in complex with the guanosine triphosphatase release factor 3
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.8 Å
Loop
- Sequence
- GUGG*CACAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V8O_210 not in the Motif Atlas
- Geometric match to IL_4WF9_124
- Geometric discrepancy: 0.3984
- The information below is about IL_4WF9_124
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_10994.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
4V8O|1|AA|G|951
4V8O|1|AA|U|952
4V8O|1|AA|G|953
4V8O|1|AA|G|954
*
4V8O|1|AA|C|1226
4V8O|1|AA|A|1227
4V8O|1|AA|C|1228
4V8O|1|AA|A|1229
4V8O|1|AA|C|1230
Current chains
- Chain AA
- 16S RRNA
Nearby chains
- Chain AI
- 30S RIBOSOMAL PROTEIN S9
- Chain AM
- 30S RIBOSOMAL PROTEIN S13
- Chain AS
- 30S RIBOSOMAL PROTEIN S19
- Chain AV
- Transfer RNA; tRNA
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