IL_4V8O_222

3D structure

PDB id

4V8O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the hybrid state of ribosome in complex with the guanosine triphosphatase release factor 3

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

GGAUGU*GCGCC

Length

11 nucleotides

Bulged bases

4V8O|1|BA|U|1033

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V8O|1|BA|G|1030
4V8O|1|BA|G|1031
4V8O|1|BA|A|1032
4V8O|1|BA|U|1033
4V8O|1|BA|G|1034
4V8O|1|BA|U|1035
*
4V8O|1|BA|G|1120
4V8O|1|BA|C|1121
4V8O|1|BA|G|1122
4V8O|1|BA|C|1123
4V8O|1|BA|C|1124

Current chains

Chain BA

23S RIBOSOMAL RNA

Nearby chains

Chain B9

50S RIBOSOMAL PROTEIN L36

Chain BH

50S RIBOSOMAL PROTEIN L6

Chain BQ

50S RIBOSOMAL PROTEIN L16