IL_4V8U_111
3D structure
- PDB id
- 4V8U (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.7 Å
Loop
- Sequence
- CGAUGC*GUAAG
- Length
- 11 nucleotides
- Bulged bases
- 4V8U|1|BA|U|1205
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V8U_111 not in the Motif Atlas
- Geometric match to IL_4V9F_056
- Geometric discrepancy: 0.3296
- The information below is about IL_4V9F_056
- Detailed Annotation
- tSH-tHH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_62654.1
- Basepair signature
- cWW-tSH-tHH-tHS-cWW
- Number of instances in this motif group
- 1
Unit IDs
4V8U|1|BA|C|1202
4V8U|1|BA|G|1203
4V8U|1|BA|A|1204
4V8U|1|BA|U|1205
4V8U|1|BA|G|1206
4V8U|1|BA|C|1207
*
4V8U|1|BA|G|1239
4V8U|1|BA|U|1240
4V8U|1|BA|A|1241
4V8U|1|BA|A|1242
4V8U|1|BA|G|1243
Current chains
- Chain BA
- 23S RIBOSOMAL RNA
Nearby chains
- Chain BF
- 50S RIBOSOMAL PROTEIN L4
- Chain BP
- 50S RIBOSOMAL PROTEIN L15
Coloring options: