IL_4V8U_190

3D structure

PDB id

4V8U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex.

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

CAU*AG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V8U_190 not in the Motif Atlas

Homologous match to IL_4LFB_004

Geometric discrepancy: 0.1522

The information below is about IL_4LFB_004

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_34520.4

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

68

Unit IDs

4V8U|1|CA|C|54
4V8U|1|CA|A|55
4V8U|1|CA|U|56
*
4V8U|1|CA|A|356
4V8U|1|CA|G|357

Current chains

Chain CA

16S RIBOSOMAL RNA

Nearby chains

Chain CT

30S RIBOSOMAL PROTEIN S20

Chain CY

ELONGATION FACTOR G