IL_4V8U_200

3D structure

PDB id

4V8U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex.

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

GG*UGGCC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V8U_200 not in the Motif Atlas

Homologous match to IL_4LFB_013

Geometric discrepancy: 0.1099

The information below is about IL_4LFB_013

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_06671.2

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

11

Unit IDs

4V8U|1|CA|G|292
4V8U|1|CA|G|293
*
4V8U|1|CA|U|304
4V8U|1|CA|G|305
4V8U|1|CA|G|306
4V8U|1|CA|C|307
4V8U|1|CA|C|308

Current chains

Chain CA

16S RIBOSOMAL RNA

Nearby chains

Chain CL

30S RIBOSOMAL PROTEIN S12

Chain CP

30S RIBOSOMAL PROTEIN S16