3D structure

PDB id
4V8U (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex.
Experimental method
X-RAY DIFFRACTION
Resolution
3.7 Å

Loop

Sequence
CCGGUG*UGAACG
Length
12 nucleotides
Bulged bases
4V8U|1|BA|A|1900
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V8U|1|BA|C|1837
4V8U|1|BA|C|1838
4V8U|1|BA|G|1839
4V8U|1|BA|G|1840
4V8U|1|BA|U|1841
4V8U|1|BA|G|1842
*
4V8U|1|BA|U|1898
4V8U|1|BA|G|1899
4V8U|1|BA|A|1900
4V8U|1|BA|A|1901
4V8U|1|BA|C|1902
4V8U|1|BA|G|1903

Current chains

Chain BA
23S RIBOSOMAL RNA

Nearby chains

Chain AA
Small subunit ribosomal RNA; SSU rRNA
Chain BD
50S RIBOSOMAL PROTEIN L2

Coloring options:

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