IL_4V8X_040
3D structure
- PDB id
- 4V8X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Thermus thermophilus ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.35 Å
Loop
- Sequence
- GUG*CC
- Length
- 5 nucleotides
- Bulged bases
- 4V8X|1|AA|U|1049
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V8X_040 not in the Motif Atlas
- Homologous match to IL_4LFB_042
- Geometric discrepancy: 0.1061
- The information below is about IL_4LFB_042
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_89505.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 117
Unit IDs
4V8X|1|AA|G|1048
4V8X|1|AA|U|1049
4V8X|1|AA|G|1050
*
4V8X|1|AA|C|1208
4V8X|1|AA|C|1209
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AN
- 30S RIBOSOMAL PROTEIN S14 TYPE Z
- Chain AY
- TOXIN OF THE YOEB-YEFM TOXIN-ANTITOXIN SYSTEM
Coloring options: