IL_4V8X_389

3D structure

PDB id

4V8X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Thermus thermophilus ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.35 Å

Loop

Sequence

GGGAG*UGACU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V8X|1|CA|G|1415
4V8X|1|CA|G|1416
4V8X|1|CA|G|1417
4V8X|1|CA|A|1418
4V8X|1|CA|G|1419
*
4V8X|1|CA|U|1481
4V8X|1|CA|G|1482
4V8X|1|CA|A|1483
4V8X|1|CA|C|1484
4V8X|1|CA|U|1485

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain DA

Large subunit ribosomal RNA; LSU rRNA