IL_4V8Y_243

3D structure

PDB id

4V8Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM reconstruction of the 80S-eIF5B-Met-itRNAMet Eukaryotic Translation Initiation Complex

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

CUGCGUAGGAUAG*CCUG

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V8Y|1|CN|C|2129
4V8Y|1|CN|U|2130
4V8Y|1|CN|G|2131
4V8Y|1|CN|C|2132
4V8Y|1|CN|G|2133
4V8Y|1|CN|U|2134
4V8Y|1|CN|A|2135
4V8Y|1|CN|G|2136
4V8Y|1|CN|G|2137
4V8Y|1|CN|A|2138
4V8Y|1|CN|U|2139
4V8Y|1|CN|A|2140
4V8Y|1|CN|G|2141
*
4V8Y|1|CN|C|2199
4V8Y|1|CN|C|2200
4V8Y|1|CN|U|2201
4V8Y|1|CN|G|2202

Current chains

Chain CN

EUKARYOTIC RIBOSOMAL L1_RRNA

Nearby chains

Chain By

50S RIBOSOMAL PROTEIN L1

Chain CL

50S RIBOSOMAL PROTEIN L1

Chain CW

Transfer RNA; tRNA