IL_4V90_012

3D structure

PDB id

4V90 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.95 Å

Loop

Sequence

CGC*GUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V90_012 not in the Motif Atlas

Geometric match to IL_4V88_417

Geometric discrepancy: 0.1278

The information below is about IL_4V88_417

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_44258.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

301

Unit IDs

4V90|1|AA|C|188
4V90|1|AA|G|189
4V90|1|AA|C|189|||A
*
4V90|1|AA|G|189|||J
4V90|1|AA|U|189|||K
4V90|1|AA|G|189|||L

Current chains

Chain AA

16S RIBOSOMAL RNA

Nearby chains

Chain AT

30S RIBOSOMAL PROTEIN S20