IL_4V90_090

3D structure

PDB id

4V90 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.95 Å

Loop

Sequence

CGC*GGAG

Length

7 nucleotides

Bulged bases

4V90|1|BA|G|932

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V90_090 not in the Motif Atlas

Homologous match to IL_7RQB_025

Geometric discrepancy: 0.2985

The information below is about IL_7RQB_025

Detailed Annotation

Intercalated cWW

Broad Annotation

Intercalated cWW

Motif group

IL_52767.4

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

28

Unit IDs

4V90|1|BA|C|844
4V90|1|BA|G|845
4V90|1|BA|C|846
*
4V90|1|BA|G|931
4V90|1|BA|G|932
4V90|1|BA|A|933
4V90|1|BA|G|934

Current chains

Chain BA

23S RIBOSOMAL RNA

Nearby chains

Chain B3

50S RIBOSOMAL PROTEIN L30