IL_4V90_096
3D structure
- PDB id
- 4V90 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermus thermophilus Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.95 Å
Loop
- Sequence
- GCUAG*CAAAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V90_096 not in the Motif Atlas
- Geometric match to IL_4WFL_001
- Geometric discrepancy: 0.2454
- The information below is about IL_4WFL_001
- Detailed Annotation
- Double sheared with non-canonical cWW
- Broad Annotation
- Double sheared
- Motif group
- IL_87767.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 17
Unit IDs
4V90|1|BA|G|875
4V90|1|BA|C|876
4V90|1|BA|U|877
4V90|1|BA|A|878
4V90|1|BA|G|879
*
4V90|1|BA|C|898
4V90|1|BA|A|899
4V90|1|BA|A|900
4V90|1|BA|A|901
4V90|1|BA|C|902
Current chains
- Chain BA
- 23S RIBOSOMAL RNA
Nearby chains
- Chain BQ
- 50S RIBOSOMAL PROTEIN L16
- Chain BZ
- 50S RIBOSOMAL PROTEIN L25
Coloring options: