IL_4V90_119

3D structure

PDB id

4V90 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.95 Å

Loop

Sequence

CGAUG*CUAAG

Length

10 nucleotides

Bulged bases

4V90|1|BA|U|1420

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V90_119 not in the Motif Atlas

Geometric match to IL_4WF9_051

Geometric discrepancy: 0.2976

The information below is about IL_4WF9_051

Detailed Annotation

UAA/GAN

Broad Annotation

UAA/GAN

Motif group

IL_89021.2

Basepair signature

cWW-L-R-L-R-tHS-cWW

Number of instances in this motif group

6

Unit IDs

4V90|1|BA|C|1417
4V90|1|BA|G|1418
4V90|1|BA|A|1419
4V90|1|BA|U|1420
4V90|1|BA|G|1421
*
4V90|1|BA|C|1577
4V90|1|BA|U|1578
4V90|1|BA|A|1579
4V90|1|BA|A|1580
4V90|1|BA|G|1581

Current chains

Chain BA

23S RIBOSOMAL RNA

Nearby chains