IL_4V90_135

3D structure

PDB id

4V90 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.95 Å

Loop

Sequence

CUGCGAAC*GGAGGUAUAG

Length

18 nucleotides

Bulged bases

4V90|1|BA|G|1801, 4V90|1|BA|G|1816, 4V90|1|BA|U|1820

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V90|1|BA|C|1797
4V90|1|BA|U|1798
4V90|1|BA|G|1799
4V90|1|BA|C|1800
4V90|1|BA|G|1801
4V90|1|BA|A|1802
4V90|1|BA|A|1803
4V90|1|BA|C|1804
*
4V90|1|BA|G|1813
4V90|1|BA|G|1814
4V90|1|BA|A|1815
4V90|1|BA|G|1816
4V90|1|BA|G|1817
4V90|1|BA|U|1818
4V90|1|BA|A|1819
4V90|1|BA|U|1820
4V90|1|BA|A|1821
4V90|1|BA|G|1822

Current chains

Chain BA

23S RIBOSOMAL RNA

Nearby chains

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain BD

50S RIBOSOMAL PROTEIN L2