IL_4V92_010
3D structure
- PDB id
- 4V92 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UUAUUU*AUUCA
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V92_010 not in the Motif Atlas
- Homologous match to IL_4V88_393
- Geometric discrepancy: 0.1979
- The information below is about IL_4V88_393
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_37842.2
- Basepair signature
- cWW-cWW-L-R-cWW-cWW-R-L
- Number of instances in this motif group
- 4
Unit IDs
4V92|1|A2|U|117
4V92|1|A2|U|118
4V92|1|A2|A|119
4V92|1|A2|U|120
4V92|1|A2|U|121
4V92|1|A2|U|122
*
4V92|1|A2|A|295
4V92|1|A2|U|296
4V92|1|A2|U|297
4V92|1|A2|C|298
4V92|1|A2|A|299
Current chains
- Chain A2
- 18S RRNA
Nearby chains
- Chain BE
- ES4
- Chain BG
- ES6
- Chain BI
- ES8
- Chain BY
- ES24
Coloring options: