IL_4V92_051
3D structure
- PDB id
- 4V92 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CGA*UCUUUGG
- Length
- 10 nucleotides
- Bulged bases
- 4V92|1|A2|C|1096, 4V92|1|A2|U|1098, 4V92|1|A2|G|1100
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V92_051 not in the Motif Atlas
- Geometric match to IL_5VCI_005
- Geometric discrepancy: 0.2265
- The information below is about IL_5VCI_005
- Detailed Annotation
- Not an internal loop
- Broad Annotation
- Not an internal loop
- Motif group
- IL_64417.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 18
Unit IDs
4V92|1|A2|C|1034
4V92|1|A2|G|1035
4V92|1|A2|A|1036
*
4V92|1|A2|U|1095
4V92|1|A2|C|1096
4V92|1|A2|U|1097
4V92|1|A2|U|1098
4V92|1|A2|U|1099
4V92|1|A2|G|1100
4V92|1|A2|G|1101
Current chains
- Chain A2
- 18S RRNA
Nearby chains
- Chain BC
- US5
- Chain BJ
- US4
- Chain BL
- US17
- Chain BW
- US8
- Chain BX
- US12
Coloring options: