IL_4V92_056

3D structure

PDB id

4V92 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CACCA*UCCCUG

Length

11 nucleotides

Bulged bases

4V92|1|A2|C|1158, 4V92|1|A2|C|1159

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V92|1|A2|C|1156
4V92|1|A2|A|1157
4V92|1|A2|C|1158
4V92|1|A2|C|1159
4V92|1|A2|A|1160
*
4V92|1|A2|U|1617
4V92|1|A2|C|1618
4V92|1|A2|C|1619
4V92|1|A2|C|1620
4V92|1|A2|U|1621
4V92|1|A2|G|1622

Current chains

Chain A2

18S RRNA

Nearby chains

Chain BF

US7

Chain BQ

US9

Chain BU

US10

Chain Bc

ES28