IL_4V92_071

3D structure

PDB id

4V92 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

AAAUAG*CUUCUU

Length

12 nucleotides

Bulged bases

4V92|1|A2|A|1346, 4V92|1|A2|U|1347

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V92|1|A2|A|1344
4V92|1|A2|A|1345
4V92|1|A2|A|1346
4V92|1|A2|U|1347
4V92|1|A2|A|1348
4V92|1|A2|G|1349
*
4V92|1|A2|C|1376
4V92|1|A2|U|1377
4V92|1|A2|U|1378
4V92|1|A2|C|1379
4V92|1|A2|U|1380
4V92|1|A2|U|1381

Current chains

Chain A2

18S RRNA

Nearby chains

Chain BQ

US9

Chain BT

ES19

Chain BU

US10