IL_4V92_085
3D structure
- PDB id
- 4V92 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GUAC*GAAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V92_085 not in the Motif Atlas
- Geometric match to IL_6CZR_168
- Geometric discrepancy: 0.2126
- The information below is about IL_6CZR_168
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67743.1
- Basepair signature
- cWW-cWW-cWH-cWW
- Number of instances in this motif group
- 9
Unit IDs
4V92|1|A2|G|1649
4V92|1|A2|U|1650
4V92|1|A2|A|1651
4V92|1|A2|C|1652
*
4V92|1|A2|G|1748
4V92|1|A2|A|1749
4V92|1|A2|A|1750
4V92|1|A2|C|1751
Current chains
- Chain A2
- 18S RRNA
Nearby chains
- Chain BX
- US12
Coloring options: