IL_4V92_096

3D structure

PDB id

4V92 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GCUU*AAGU

Length

8 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_90094.1

Basepair signature

cWW-cWW-tWW-cWW

Number of instances in this motif group

11

Unit IDs

4V92|1|AZ|G|6039
4V92|1|AZ|C|6040
4V92|1|AZ|U|6041
4V92|1|AZ|U|6042
*
4V92|1|AZ|A|6075
4V92|1|AZ|A|6076
4V92|1|AZ|G|6077
4V92|1|AZ|U|6078

Current chains

Chain AZ

RNA OF CRICKET-PARALYSIS-VIRUS-IRES

Nearby chains