IL_4V92_098

3D structure

PDB id

4V92 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UUA*UUUACGUUCCAGGAUG

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_13390.1

Basepair signature

cWW-L-R-R-R-R-R-R-R-R-R-R-R-R-R-R-cWW

Number of instances in this motif group

1

Unit IDs

4V92|1|AZ|U|6100
4V92|1|AZ|U|6101
4V92|1|AZ|A|6102
*
4V92|1|AZ|U|6113
4V92|1|AZ|U|6114
4V92|1|AZ|U|6115
4V92|1|AZ|A|6116
4V92|1|AZ|C|6117
4V92|1|AZ|G|6118
4V92|1|AZ|U|6119
4V92|1|AZ|U|6120
4V92|1|AZ|C|6121
4V92|1|AZ|C|6122
4V92|1|AZ|A|6123
4V92|1|AZ|G|6124
4V92|1|AZ|G|6125
4V92|1|AZ|A|6126
4V92|1|AZ|U|6127
4V92|1|AZ|G|6128

Current chains

Chain AZ

RNA OF CRICKET-PARALYSIS-VIRUS-IRES

Nearby chains

Chain BF

US7