IL_4V92_108
3D structure
- PDB id
- 4V92 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GAAAAAAUU*AUAUUAGC
- Length
- 17 nucleotides
- Bulged bases
- 4V92|1|A2|U|794
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V92_108 not in the Motif Atlas
- Homologous match to IL_8C3A_503
- Geometric discrepancy: 0.3722
- The information below is about IL_8C3A_503
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_44416.1
- Basepair signature
- cWW-cWW-L-R-L-R-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
4V92|1|A2|G|751
4V92|1|A2|A|752
4V92|1|A2|A|753
4V92|1|A2|A|754
4V92|1|A2|A|755
4V92|1|A2|A|756
4V92|1|A2|A|757
4V92|1|A2|U|758
4V92|1|A2|U|759
*
4V92|1|A2|A|791
4V92|1|A2|U|792
4V92|1|A2|A|793
4V92|1|A2|U|794
4V92|1|A2|U|795
4V92|1|A2|A|796
4V92|1|A2|G|797
4V92|1|A2|C|798
Current chains
- Chain A2
- 18S RRNA
Nearby chains
- Chain BE
- ES4
- Chain BJ
- US4
Coloring options: