IL_4V92_109
3D structure
- PDB id
- 4V92 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GGAC*GUUUU
- Length
- 9 nucleotides
- Bulged bases
- 4V92|1|A2|U|959
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V92_109 not in the Motif Atlas
- Homologous match to IL_8C3A_436
- Geometric discrepancy: 0.3123
- The information below is about IL_8C3A_436
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_30621.4
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 66
Unit IDs
4V92|1|A2|G|867
4V92|1|A2|G|868
4V92|1|A2|A|869
4V92|1|A2|C|870
*
4V92|1|A2|G|957
4V92|1|A2|U|958
4V92|1|A2|U|959
4V92|1|A2|U|960
4V92|1|A2|U|961
Current chains
- Chain A2
- 18S RRNA
Nearby chains
- Chain BH
- ES7
- Chain BN
- US15
- Chain BW
- US8
- Chain Bb
- ES27
Coloring options: