IL_4V92_113

3D structure

PDB id

4V92 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

AUAAGGAUUGACAG*CUUUCUUGAUUU

Length

26 nucleotides

Bulged bases

4V92|1|A2|G|1228

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V92|1|A2|A|1224
4V92|1|A2|U|1225
4V92|1|A2|A|1226
4V92|1|A2|A|1227
4V92|1|A2|G|1228
4V92|1|A2|G|1229
4V92|1|A2|A|1230
4V92|1|A2|U|1231
4V92|1|A2|U|1232
4V92|1|A2|G|1233
4V92|1|A2|A|1234
4V92|1|A2|C|1235
4V92|1|A2|A|1236
4V92|1|A2|G|1237
*
4V92|1|A2|C|1248
4V92|1|A2|U|1249
4V92|1|A2|U|1250
4V92|1|A2|U|1251
4V92|1|A2|C|1252
4V92|1|A2|U|1253
4V92|1|A2|U|1254
4V92|1|A2|G|1255
4V92|1|A2|A|1256
4V92|1|A2|U|1257
4V92|1|A2|U|1258
4V92|1|A2|U|1259

Current chains

Chain A2

18S RRNA

Nearby chains

Chain BK

ES10

Chain BM

ES12

Chain BP

US19

Chain Bf

ES31