IL_4V95_267
3D structure
- PDB id
- 4V95 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of YAEJ bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GCCA*UGC
- Length
- 7 nucleotides
- Bulged bases
- 4V95|1|DA|C|995
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V95_267 not in the Motif Atlas
- Geometric match to IL_5ML7_010
- Geometric discrepancy: 0.3692
- The information below is about IL_5ML7_010
- Detailed Annotation
- Isolated non-canonical cWW with bulges
- Broad Annotation
- Isolated non-canonical cWW with bulges
- Motif group
- IL_07785.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 33
Unit IDs
4V95|1|DA|G|993
4V95|1|DA|C|994
4V95|1|DA|C|995
4V95|1|DA|A|996
*
4V95|1|DA|U|1159
4V95|1|DA|G|1160
4V95|1|DA|C|1161
Current chains
- Chain DA
- 23S Ribosomal RNA
Nearby chains
- Chain D3
- 50S Ribosomal Protein L30
- Chain DN
- 50S Ribosomal Protein L13
- Chain DU
- 50S Ribosomal Protein L20
- Chain DV
- 50S Ribosomal Protein L21
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