IL_4V97_018

3D structure

PDB id

4V97 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome ram mutation G299A.

Experimental method

X-RAY DIFFRACTION

Resolution

3.52 Å

Loop

Sequence

GGAAGAAG*UGUAAAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V97_018 not in the Motif Atlas

Homologous match to IL_4LFB_017

Geometric discrepancy: 0.1295

The information below is about IL_4LFB_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_28026.3

Basepair signature

cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW

Number of instances in this motif group

2

Unit IDs

4V97|1|AA|G|409
4V97|1|AA|G|410
4V97|1|AA|A|411
4V97|1|AA|A|412
4V97|1|AA|G|413
4V97|1|AA|A|414
4V97|1|AA|A|415
4V97|1|AA|G|416
*
4V97|1|AA|U|427
4V97|1|AA|G|428
4V97|1|AA|U|429
4V97|1|AA|A|430
4V97|1|AA|A|431
4V97|1|AA|A|432
4V97|1|AA|C|433

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AD

30S ribosomal protein S4