IL_4V97_042

3D structure

PDB id

4V97 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome ram mutation G299A.

Experimental method

X-RAY DIFFRACTION

Resolution

3.52 Å

Loop

Sequence

GGUG*CCC

Length

7 nucleotides

Bulged bases

4V97|1|AA|U|1049

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V97_042 not in the Motif Atlas

Geometric match to IL_2D6F_001

Geometric discrepancy: 0.2803

The information below is about IL_2D6F_001

Detailed Annotation

Self complementary

Broad Annotation

Self complementary

Motif group

IL_52767.5

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

28

Unit IDs

4V97|1|AA|G|1047
4V97|1|AA|G|1048
4V97|1|AA|U|1049
4V97|1|AA|G|1050
*
4V97|1|AA|C|1208
4V97|1|AA|C|1209
4V97|1|AA|C|1210

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AN

30S ribosomal protein S14 type Z