IL_4V97_102

3D structure

PDB id

4V97 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome ram mutation G299A.

Experimental method

X-RAY DIFFRACTION

Resolution

3.52 Å

Loop

Sequence

CGC*GCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: CGC,GCG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V97_102 not in the Motif Atlas

Homologous match to IL_4WF9_042

Geometric discrepancy: 0.2891

The information below is about IL_4WF9_042

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

214

Unit IDs

4V97|1|BA|C|1038
4V97|1|BA|G|1039
4V97|1|BA|C|1040
*
4V97|1|BA|G|1115
4V97|1|BA|C|1116
4V97|1|BA|G|1117

Current chains

Chain BA

23S rRNA

Nearby chains

Chain BQ

50S RIBOSOMAL PROTEIN L16

Chain BZ

50S RIBOSOMAL PROTEIN L25