IL_4V97_157

3D structure

PDB id

4V97 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome ram mutation G299A.

Experimental method

X-RAY DIFFRACTION

Resolution

3.52 Å

Loop

Sequence

CUC*GCGAG

Length

8 nucleotides

Bulged bases

4V97|1|BA|G|2576, 4V97|1|BA|A|2577

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V97_157 not in the Motif Atlas

Homologous match to IL_4WF9_095

Geometric discrepancy: 0.0749

The information below is about IL_4WF9_095

Detailed Annotation

Isolated non-canonical cWW with bulges

Broad Annotation

Isolated non-canonical cWW with bulges

Motif group

IL_68118.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

29

Unit IDs

4V97|1|BA|C|2510
4V97|1|BA|U|2511
4V97|1|BA|C|2512
*
4V97|1|BA|G|2574
4V97|1|BA|C|2575
4V97|1|BA|G|2576
4V97|1|BA|A|2577
4V97|1|BA|G|2578

Current chains

Chain BA

23S rRNA

Nearby chains

Chain B5

50S RIBOSOMAL PROTEIN L32

Chain BE

50S RIBOSOMAL PROTEIN L3