3D structure

PDB id
4V97 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the bacterial ribosome ram mutation G299A.
Experimental method
X-RAY DIFFRACTION
Resolution
3.52 Å

Loop

Sequence
GUUGC*GGCACUC
Length
12 nucleotides
Bulged bases
4V97|1|CA|U|1125
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4V97_223 not in the Motif Atlas
Homologous match to IL_4LFB_048
Geometric discrepancy: 0.2367
The information below is about IL_4LFB_048
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_85222.1
Basepair signature
cWW-L-R-L-R-L-cWW-L-L
Number of instances in this motif group
1

Unit IDs

4V97|1|CA|G|1124
4V97|1|CA|U|1125
4V97|1|CA|U|1126
4V97|1|CA|G|1127
4V97|1|CA|C|1128
*
4V97|1|CA|G|1143
4V97|1|CA|G|1144
4V97|1|CA|C|1145
4V97|1|CA|A|1146
4V97|1|CA|C|1147
4V97|1|CA|U|1148
4V97|1|CA|C|1149

Current chains

Chain CA
16S rRNA

Nearby chains

Chain CI
30S ribosomal protein S9
Chain CJ
30S ribosomal protein S10

Coloring options:


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