IL_4V97_259
3D structure
- PDB id
- 4V97 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the bacterial ribosome ram mutation G299A.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.52 Å
Loop
- Sequence
- GAAAC*GAGAUAGC
- Length
- 13 nucleotides
- Bulged bases (A, C, G, U)
- 801G, 805G
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V97_259 not in the Motif Atlas
- Geometric match to IL_4WF9_021
- Geometric discrepancy: 0.0767
- The information below is about IL_4WF9_021
- Detailed Annotation
- tHW-tHW cross-strand stack
- Broad Annotation
- No text annotation
- Motif group
- IL_17470.7
- Basepair signature
- cWW-tWW-L-R-tWH-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
4V97|1|DA|G|674
4V97|1|DA|A|675
4V97|1|DA|A|676
4V97|1|DA|A|677
4V97|1|DA|C|678
*
4V97|1|DA|G|799
4V97|1|DA|A|800
4V97|1|DA|G|801
4V97|1|DA|A|802
4V97|1|DA|U|803
4V97|1|DA|A|804
4V97|1|DA|G|805
4V97|1|DA|C|806
Current chains
- Chain DA
- 23S rRNA
Nearby chains
- Chain DF
- 50S RIBOSOMAL PROTEIN L4
- Chain DP
- 50S RIBOSOMAL PROTEIN L15
Coloring options: