IL_4V9B_405

3D structure

PDB id

4V9B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the 70S ribosome with tigecycline.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GCUAGGG*UACCAAAC

Length

15 nucleotides

Bulged bases

4V9B|1|DA|U|877

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9B|1|DA|G|875
4V9B|1|DA|C|876
4V9B|1|DA|U|877
4V9B|1|DA|A|878
4V9B|1|DA|G|879
4V9B|1|DA|G|880
4V9B|1|DA|G|881
*
4V9B|1|DA|U|895
4V9B|1|DA|A|896
4V9B|1|DA|C|897
4V9B|1|DA|C|898
4V9B|1|DA|A|899
4V9B|1|DA|A|900
4V9B|1|DA|A|901
4V9B|1|DA|C|902

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain DP

50S ribosomal protein L16

Chain DV

50S ribosomal protein L25