IL_4V9D_301

3D structure

PDB id

4V9D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of the bacterial ribosome in classical and hybrid states of tRNA binding

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

AGCACUG*CAAACU

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9D|1|DA|A|863
4V9D|1|DA|G|864
4V9D|1|DA|C|865
4V9D|1|DA|A|866
4V9D|1|DA|C|867
4V9D|1|DA|U|868
4V9D|1|DA|G|869
*
4V9D|1|DA|C|908
4V9D|1|DA|A|909
4V9D|1|DA|A|910
4V9D|1|DA|A|911
4V9D|1|DA|C|912
4V9D|1|DA|U|913

Current chains

Chain DA

23S rRNA

Nearby chains

Chain DB

5S ribosomal RNA; 5S rRNA

Chain DM

50S ribosomal protein L16

Chain DW

50S ribosomal protein L27