IL_4V9D_405

3D structure

PDB id

4V9D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of the bacterial ribosome in classical and hybrid states of tRNA binding

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

AGAAG*CGGACCU

Length

12 nucleotides

Bulged bases

4V9D|1|BA|A|1257, 4V9D|1|BA|A|1280, 4V9D|1|BA|C|1281

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9D|1|BA|A|1254
4V9D|1|BA|G|1255
4V9D|1|BA|A|1256
4V9D|1|BA|A|1257
4V9D|1|BA|G|1258
*
4V9D|1|BA|C|1277
4V9D|1|BA|G|1278
4V9D|1|BA|G|1279
4V9D|1|BA|A|1280
4V9D|1|BA|C|1281
4V9D|1|BA|C|1282
4V9D|1|BA|U|1283

Current chains

Chain BA

16S rRNA

Nearby chains

Chain BC

30S ribosomal protein S3

Chain BJ

30S ribosomal protein S10

Chain BN

30S ribosomal protein S14