IL_4V9D_407
3D structure
- PDB id
- 4V9D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of the bacterial ribosome in classical and hybrid states of tRNA binding
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UCC*GGA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V9D_407 not in the Motif Atlas
- Geometric match to IL_5TBW_079
- Geometric discrepancy: 0.1816
- The information below is about IL_5TBW_079
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
4V9D|1|BA|U|1537
4V9D|1|BA|C|1538
4V9D|1|BA|C|1539
*
4V9D|1|BX|G|6
4V9D|1|BX|G|7
4V9D|1|BX|A|8
Current chains
- Chain BA
- 16S rRNA
- Chain BX
- messenger RNA
Nearby chains
- Chain BG
- 30S ribosomal protein S7
- Chain BK
- 30S ribosomal protein S11
- Chain BR
- 30S ribosomal protein S18
- Chain BU
- 30S ribosomal protein S21
Coloring options: