IL_4V9D_416

3D structure

PDB id

4V9D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of the bacterial ribosome in classical and hybrid states of tRNA binding

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUUUGAAGU*AUGGAG

Length

15 nucleotides

Bulged bases

4V9D|1|CA|U|2132

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9D|1|CA|C|2129
4V9D|1|CA|U|2130
4V9D|1|CA|U|2131
4V9D|1|CA|U|2132
4V9D|1|CA|G|2133
4V9D|1|CA|A|2134
4V9D|1|CA|A|2135
4V9D|1|CA|G|2136
4V9D|1|CA|U|2137
*
4V9D|1|CA|A|2154
4V9D|1|CA|U|2155
4V9D|1|CA|G|2156
4V9D|1|CA|G|2157
4V9D|1|CA|A|2158
4V9D|1|CA|G|2159

Current chains

Chain CA

23S rRNA

Nearby chains

Chain BA

Small subunit ribosomal RNA; SSU rRNA