IL_4V9F_001
3D structure
- PDB id
- 4V9F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The re-refined crystal structure of the Haloarcula marismortui large ribosomal subunit at 2.4 Angstrom resolution: more complete structure of the L7/L12 and L1 stalk, L5 and LX proteins
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.4 Å
Loop
- Sequence
- GUGGAUU*AUGAAAU
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- Triple sheared with non-canonical cWW
- Broad Annotation
- Triple sheared
- Motif group
- IL_04021.2
- Basepair signature
- cWW-L-R-tSH-tSH-tHS-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
4V9F|1|0|G|21
4V9F|1|0|U|22
4V9F|1|0|G|23
4V9F|1|0|G|24
4V9F|1|0|A|25
4V9F|1|0|U|26
4V9F|1|0|U|27
*
4V9F|1|0|A|516
4V9F|1|0|U|517
4V9F|1|0|G|518
4V9F|1|0|A|519
4V9F|1|0|A|520
4V9F|1|0|A|521
4V9F|1|0|U|522
Current chains
- Chain 0
- 23S Ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L4P
- Chain R
- 50S ribosomal protein L22P
- Chain Y
- 50S ribosomal protein L32e
Coloring options: