IL_4V9F_102
3D structure
- PDB id
- 4V9F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The re-refined crystal structure of the Haloarcula marismortui large ribosomal subunit at 2.4 Angstrom resolution: more complete structure of the L7/L12 and L1 stalk, L5 and LX proteins
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.4 Å
Loop
- Sequence
- GGUUGCCU*AUAAGC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- Minor groove platform related
- Broad Annotation
- No text annotation
- Motif group
- IL_67623.1
- Basepair signature
- cWW-tSW-cSW-L-cSW-L-R-L-cWW-cWW
- Number of instances in this motif group
- 1
Unit IDs
4V9F|1|9|G|21
4V9F|1|9|G|22
4V9F|1|9|U|23
4V9F|1|9|U|24
4V9F|1|9|G|25
4V9F|1|9|C|26
4V9F|1|9|C|27
4V9F|1|9|U|28
*
4V9F|1|9|A|54
4V9F|1|9|U|55
4V9F|1|9|A|56
4V9F|1|9|A|57
4V9F|1|9|G|58
4V9F|1|9|C|59
Current chains
- Chain 9
- 5S Ribosomal RNA
Nearby chains
- Chain D
- 50S ribosomal protein L5P
- Chain N
- 50S ribosomal protein L18P
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