3D structure

PDB id
4V9H (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase state
Experimental method
X-RAY DIFFRACTION
Resolution
2.86 Å

Loop

Sequence
CAA*UCG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4V9H_130 not in the Motif Atlas
Homologous match to IL_7RQB_065
Geometric discrepancy: 0.0655
The information below is about IL_7RQB_065
Detailed Annotation
Isolated tWW turn
Broad Annotation
No text annotation
Motif group
IL_54997.7
Basepair signature
cWW-tWW-cWW
Number of instances in this motif group
8

Unit IDs

4V9H|1|BA|C|1663
4V9H|1|BA|A|1664
4V9H|1|BA|A|1665
*
4V9H|1|BA|U|1995
4V9H|1|BA|C|1996
4V9H|1|BA|G|1997

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain BE
50S ribosomal protein L3
Chain BO
50S ribosomal protein L14
Chain BT
50S ribosomal protein L19

Coloring options:


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