IL_4V9M_013

3D structure

PDB id

4V9M (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S Ribosome translocation intermediate FA-4.2A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.

Experimental method

X-RAY DIFFRACTION

Resolution

4 Å

Loop

Sequence

CAUCAG*CGACGACG

Length

14 nucleotides

Bulged bases

4V9M|1|AA|U|244, 4V9M|1|AA|C|280

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9M|1|AA|C|242
4V9M|1|AA|A|243
4V9M|1|AA|U|244
4V9M|1|AA|C|245
4V9M|1|AA|A|246
4V9M|1|AA|G|247
*
4V9M|1|AA|C|277
4V9M|1|AA|G|278
4V9M|1|AA|A|279
4V9M|1|AA|C|280
4V9M|1|AA|G|281
4V9M|1|AA|A|282
4V9M|1|AA|C|283
4V9M|1|AA|G|284

Current chains

Chain AA

ribosomal RNA 16S

Nearby chains

Chain AL

30S ribosomal protein S12

Chain AQ

30S ribosomal protein S17